Mir-1 microRNA precursor family

Type of RNA
miR-1
mIR-1 microRNA precursor family
Identifiers
Symbolmir-1
RfamRF00103
miRBaseMI0000651
miRBase familyMIPF0000038
NCBI Gene406904
HGNCHGNC:31499
OMIM609326
Other data
RNA typeGene; miRNA;
Domain(s)Metazoa
GO0035195
SO0001244
LocusChr. 20 q13.33
PDB structuresPDBe

The miR-1 microRNA precursor is a small micro RNA that regulates its target protein's expression in the cell. microRNAs are transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give products at ~22 nucleotides.[1] In this case the mature sequence comes from the 3' arm of the precursor. The mature products are thought to have regulatory roles through complementarity to mRNA. In humans there are two distinct microRNAs that share an identical mature sequence, and these are called miR-1-1 and miR-1-2.

These micro RNAs have pivotal roles in development and physiology of muscle tissues including the heart.[2][3] MiR-1 is known to play an important role in heart diseases such as hypertrophy, myocardial infarction, and arrhythmias.[4][5][6] Studies have shown that MiR-1 is an important regulator of heart adaption after ischemia or ischaemic stress and it is upregulated in the remote myocardium of patients with myocardial infarction.[7] Also MiR-1 is downregulated in myocardial infarcted tissue compared to healthy heart tissue.[8] Plasma levels of MiR-1 can be used as a sensitive biomarker for myocardial infarction.[9]

Targets of miR-1

The heat shock protein, HSP60 is also known to be a target for post-transcriptional regulation by miR-1 and miR-206. HSP60 is a component of the defence mechanism against diabetic myocardial injury and its level is reduced in the diabetic myocardium. In both in vivo and in vitro experiments increased levels of glucose in myocardiomyctes led to significant upregulation of miR-1 and miR-206 with resulting modulation of HSP60 leading to accelerated glucose-mediated apoptosis in cardiomyocytes.[10]

MiR-1 has key roles in the development and differentiation of smooth and skeletal muscles.[11][12][13] For example, in the lineage-specific differentiation of smooth muscle cells from embryonic stem cell derived cultures, MiR-1 is required; as its loss of function resulted in a reduction in smooth muscle cell biomarkers and a reduction in the derived smooth muscle cell population. There is evidence that the control of smooth muscle cell differentiation by MiR-1 may be mediated by the down regulation of Kruppel-like factor 4 (KLF4), since a MiR-1 recognition site is predicted in the 3' UTR of KLF4 and inhibition of MiR-1 results in reversed down-regulation of KLF4 and an inhibition of smooth muscle cell differentiation.[14] A mutation in the 3' UTR of the myostatin gene in Texel sheep creates a miR-1 and miR-206 target site. This is likely to cause the muscular phenotype of this breed of sheep.[15]

Clinical relevance of miR-1

Mir-1 plays an important role in some cancers. Rhabdomyosarcoma is the most common soft tissue sarcoma in children. Since the tumor results from undifferentiated cells, agents that promote differentiation hold promise as possible therapies. A study showed that levels of mir-1 and mir-133a were drastically reduced in tumourous cell lines whilst their targets were up-regulated.[16]

Introduction of miR-1 and miR-133a into an embryonal rhabdomyosarcoma-derived cell line is cytostatic, which suggested a strong tumour-suppressive role for these microRNAs. Expression of miR-1 but not miR-133a gave transcriptional profiles that were consistent with a strong promyogenic influence on the cells, again demonstrating the role of miR-1 in muscle differentiation from precursor stem cells. The authors propose that miR-1 and miR-133a act to repress isoforms of genes that are not normally expressed in muscle cells. All of these observations suggest that mis-regulation of miR-1 and miR-133a can result in tumorogenesis via abolition of the suppressive effect they have on certain gene targets and of the removal of the promotion of differentiation of the cells exerted my miR-1.[16]

The involvement of miR-1 in cancer is not limited to cancers of muscle and muscle tissues. MiR-1 may have a tumour-suppressive effect in bladder cancer by regulation of LIM and SH3 protein 1 (LASP1) .[17]

There is evidence for the role of miR-1-2 as a modulator in acute myeloid leukemia via its transcription by the zinc-finger transcription factor, EVI1, ectopic virus expression site 1. ChIP assays have shown that EVI1 binds strongly to the promoters of miR-1-2 and miR-133-a-1, and expression of EVI1 is significantly correlated with the expression of miR-1-2 and miR-133-a-1 in established cell lines and in patient samples. However, only miR-1-2 was involved in abnormal proliferation in EVI1 expressing cell lines.[18]

miR-1 and related microRNA miR-499 are proposed to be involved in the regulation of hepatocellular carcinoma (HCC) pathogenesis.[19] These two microRNAs have been shown to downregulate the expression of the ets1 proto-oncogene in cell lines HepG2 by targeting the 3'UTR of ets1. ets1 is involved in extracellular matrix (ECM) degradation which is an important process required for tumor cell invasion and migration.

References

  1. ^ Qureshi A, Thakur N, Monga I, Thakur A, Kumar M (1 January 2014). "VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets". Database. 2014: bau103. doi:10.1093/database/bau103. PMC 4224276. PMID 25380780.
  2. ^ Mishima Y, Stahlhut C, Giraldez AJ (April 2007). "miR-1-2 gets to the heart of the matter". Cell. 129 (2): 247–9. doi:10.1016/j.cell.2007.04.008. PMID 17448987. S2CID 16755349.
  3. ^ Zhao Y, Ransom JF, Li A, Vedantham V, von Drehle M, Muth AN, et al. (April 2007). "Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2". Cell. 129 (2): 303–17. doi:10.1016/j.cell.2007.03.030. PMID 17397913. S2CID 10796290.
  4. ^ Cai B, Pan Z, Lu Y (2010). "The roles of microRNAs in heart diseases: a novel important regulator". Current Medicinal Chemistry. 17 (5): 407–11. doi:10.2174/092986710790226129. PMID 20015039.
  5. ^ Silvestri P, Di Russo C, Rigattieri S, Fedele S, Todaro D, Ferraiuolo G, et al. (June 2009). "MicroRNAs and ischemic heart disease: towards a better comprehension of pathogenesis, new diagnostic tools and new therapeutic targets". Recent Patents on Cardiovascular Drug Discovery. 4 (2): 109–18. doi:10.2174/157489009788452977. PMID 19519553.
  6. ^ Zorio E, Medina P, Rueda J, Millán JM, Arnau MA, Beneyto M, Marín F, Gimeno JR, Osca J, Salvador A, España F, Estellés A (January 2009). "Insights into the role of microRNAs in cardiac diseases: from biological signalling to therapeutic targets". Cardiovascular & Hematological Agents in Medicinal Chemistry. 7 (1): 82–90. doi:10.2174/187152509787047676. PMID 19149547.
  7. ^ Bostjancic E, Zidar N, Stajner D, Glavac D (2010). "MicroRNA miR-1 is up-regulated in remote myocardium in patients with myocardial infarction". Folia Biologica. 56 (1): 27–31. PMID 20163779.
  8. ^ Bostjancic E, Zidar N, Stajer D, Glavac D (2010). "MicroRNAs miR-1, miR-133a, miR-133b and miR-208 are dysregulated in human myocardial infarction". Cardiology. 115 (3): 163–9. doi:10.1159/000268088. PMID 20029200. S2CID 21323880.
  9. ^ D'Alessandra Y, Devanna P, Limana F, Straino S, Di Carlo A, Brambilla PG, et al. (November 2010). "Circulating microRNAs are new and sensitive biomarkers of myocardial infarction" (PDF). European Heart Journal. 31 (22): 2765–73. doi:10.1093/eurheartj/ehq167. PMC 2980809. PMID 20534597.
  10. ^ Shan ZX, Lin QX, Deng CY, Zhu JN, Mai LP, Liu JL, et al. (August 2010). "miR-1/miR-206 regulate Hsp60 expression contributing to glucose-mediated apoptosis in cardiomyocytes". FEBS Letters. 584 (16): 3592–600. doi:10.1016/j.febslet.2010.07.027. PMID 20655308. S2CID 38053878.
  11. ^ Chen Y, Gelfond J, McManus LM, Shireman PK (May 2011). "Temporal microRNA expression during in vitro myogenic progenitor cell proliferation and differentiation: regulation of proliferation by miR-682". Physiological Genomics. 43 (10): 621–30. doi:10.1152/physiolgenomics.00136.2010. PMC 3110887. PMID 20841498.
  12. ^ Chen JF, Tao Y, Li J, Deng Z, Yan Z, Xiao X, et al. (September 2010). "microRNA-1 and microRNA-206 regulate skeletal muscle satellite cell proliferation and differentiation by repressing Pax7". The Journal of Cell Biology. 190 (5): 867–79. doi:10.1083/jcb.200911036. PMC 2935565. PMID 20819939.
  13. ^ Townley-Tilson WH, Callis TE, Wang D (August 2010). "MicroRNAs 1, 133, and 206: critical factors of skeletal and cardiac muscle development, function, and disease". The International Journal of Biochemistry & Cell Biology. 42 (8): 1252–5. doi:10.1016/j.biocel.2009.03.002. PMC 2904322. PMID 20619221.
  14. ^ Xie C, Huang H, Sun X, Guo Y, Hamblin M, Ritchie RP, et al. (February 2011). "MicroRNA-1 regulates smooth muscle cell differentiation by repressing Kruppel-like factor 4". Stem Cells and Development. 20 (2): 205–10. doi:10.1089/scd.2010.0283. PMC 3128754. PMID 20799856.
  15. ^ Clop A, Marcq F, Takeda H, Pirottin D, Tordoir X, Bibé B, et al. (July 2006). "A mutation creating a potential illegitimate microRNA target site in the myostatin gene affects muscularity in sheep". Nature Genetics. 38 (7): 813–8. doi:10.1038/ng1810. PMID 16751773. S2CID 39767621.
  16. ^ a b Rao PK, Missiaglia E, Shields L, Hyde G, Yuan B, Shepherd CJ, et al. (September 2010). "Distinct roles for miR-1 and miR-133a in the proliferation and differentiation of rhabdomyosarcoma cells". FASEB Journal. 24 (9): 3427–37. doi:10.1096/fj.09-150698. PMC 3231107. PMID 20466878.
  17. ^ Chiyomaru T, Enokida H, Kawakami K, Tatarano S, Uchida Y, Kawahara K, et al. (2010). "Functional role of LASP1 in cell viability and its regulation by microRNAs in bladder cancer". Urologic Oncology. 30 (4): 434–43. doi:10.1016/j.urolonc.2010.05.008. PMID 20843712.
  18. ^ Gómez-Benito M, Conchillo A, García MA, Vázquez I, Maicas M, Vicente C, et al. (October 2010). "EVI1 controls proliferation in acute myeloid leukaemia through modulation of miR-1-2". British Journal of Cancer. 103 (8): 1292–6. doi:10.1038/sj.bjc.6605874. PMC 2967053. PMID 20842122.
  19. ^ Wei W, Hu Z, Fu H, Tie Y, Zhang H, Wu Y, et al. (August 2012). "MicroRNA-1 and microRNA-499 downregulate the expression of the proto-oncogene in HepG2 cells". Oncology Reports. 28 (2): 701–6. doi:10.3892/or.2012.1850. PMID 22664953.

Further reading

  • Xie C, Huang H, Sun X, Guo Y, Hamblin M, Ritchie RP, et al. (February 2011). "MicroRNA-1 regulates smooth muscle cell differentiation by repressing Kruppel-like factor 4". Stem Cells and Development. 20 (2): 205–10. doi:10.1089/scd.2010.0283. PMC 3128754. PMID 20799856.
  • Chen J, Yin H, Jiang Y, Radhakrishnan SK, Huang ZP, Li J, et al. (February 2011). "Induction of microRNA-1 by myocardin in smooth muscle cells inhibits cell proliferation". Arteriosclerosis, Thrombosis, and Vascular Biology. 31 (2): 368–75. doi:10.1161/ATVBAHA.110.218149. PMC 3207238. PMID 21051663.
  • Sumiyoshi K, Kubota S, Ohgawara T, Kawata K, Nishida T, Shimo T, et al. (November 2010). "Identification of miR-1 as a micro RNA that supports late-stage differentiation of growth cartilage cells". Biochemical and Biophysical Research Communications. 402 (2): 286–90. doi:10.1016/j.bbrc.2010.10.016. PMID 20937250.
  • Li Q, Song XW, Zou J, Wang GK, Kremneva E, Li XQ, et al. (July 2010). "Attenuation of microRNA-1 derepresses the cytoskeleton regulatory protein twinfilin-1 to provoke cardiac hypertrophy". Journal of Cell Science. 123 (Pt 14): 2444–52. doi:10.1242/jcs.067165. PMID 20571053. S2CID 11750031.
  • Jiang Y, Yin H, Zheng XL (November 2010). "MicroRNA-1 inhibits myocardin-induced contractility of human vascular smooth muscle cells". Journal of Cellular Physiology. 225 (2): 506–11. doi:10.1002/jcp.22230. PMID 20458751. S2CID 45605427.
  • Cheng Y, Tan N, Yang J, Liu X, Cao X, He P, et al. (April 2010). "A translational study of circulating cell-free microRNA-1 in acute myocardial infarction". Clinical Science. 119 (2): 87–95. doi:10.1042/CS20090645. PMC 3593815. PMID 20218970.
  • Sluijter JP, van Mil A, van Vliet P, Metz CH, Liu J, Doevendans PA, et al. (April 2010). "MicroRNA-1 and -499 regulate differentiation and proliferation in human-derived cardiomyocyte progenitor cells". Arteriosclerosis, Thrombosis, and Vascular Biology. 30 (4): 859–68. doi:10.1161/ATVBAHA.109.197434. PMID 20081117.
  • Divakaran VG (2010). "MicroRNAs miR-1, -133 and -208: same faces, new roles". Cardiology. 115 (3): 172–3. doi:10.1159/000272540. PMID 20068301. S2CID 45134661.
  • Girmatsion Z, Biliczki P, Bonauer A, Wimmer-Greinecker G, Scherer M, Moritz A, et al. (December 2009). "Changes in microRNA-1 expression and IK1 up-regulation in human atrial fibrillation". Heart Rhythm. 6 (12): 1802–9. doi:10.1016/j.hrthm.2009.08.035. PMID 19959133.
  • Elia L, Contu R, Quintavalle M, Varrone F, Chimenti C, Russo MA, et al. (December 2009). "Reciprocal regulation of microRNA-1 and insulin-like growth factor-1 signal transduction cascade in cardiac and skeletal muscle in physiological and pathological conditions". Circulation. 120 (23): 2377–85. doi:10.1161/CIRCULATIONAHA.109.879429. PMC 2825656. PMID 19933931.
  • Ai J, Zhang R, Li Y, Pu J, Lu Y, Jiao J, et al. (January 2010). "Circulating microRNA-1 as a potential novel biomarker for acute myocardial infarction". Biochemical and Biophysical Research Communications. 391 (1): 73–7. doi:10.1016/j.bbrc.2009.11.005. PMID 19896465.
  • Lin WC, Huang KY, Chen SC, Huang TY, Chen SJ, Huang PJ, et al. (November 2009). "Malate dehydrogenase is negatively regulated by miR-1 in Trichomonas vaginalis". Parasitology Research. 105 (6): 1683–9. doi:10.1007/s00436-009-1616-5. PMID 19777264. S2CID 28947709.
  • Shan H, Li X, Pan Z, Zhang L, Cai B, Zhang Y, et al. (November 2009). "Tanshinone IIA protects against sudden cardiac death induced by lethal arrhythmias via repression of microRNA-1". British Journal of Pharmacology. 158 (5): 1227–35. doi:10.1111/j.1476-5381.2009.00377.x. PMC 2782332. PMID 19775284.
  • Yan D, Dong X, Chen X, Wang L, Lu C, Wang J, et al. (October 2009). "MicroRNA-1/206 targets c-Met and inhibits rhabdomyosarcoma development". The Journal of Biological Chemistry. 284 (43): 29596–604. doi:10.1074/jbc.M109.020511. PMC 2785592. PMID 19710019.
  • Lu Y, Zhang Y, Shan H, Pan Z, Li X, Li B, et al. (December 2009). "MicroRNA-1 downregulation by propranolol in a rat model of myocardial infarction: a new mechanism for ischaemic cardioprotection". Cardiovascular Research. 84 (3): 434–41. doi:10.1093/cvr/cvp232. PMID 19581315.
  • Takaya T, Ono K, Kawamura T, Takanabe R, Kaichi S, Morimoto T, et al. (August 2009). "MicroRNA-1 and MicroRNA-133 in spontaneous myocardial differentiation of mouse embryonic stem cells". Circulation Journal. 73 (8): 1492–7. doi:10.1253/circj.CJ-08-1032. PMID 19521018.
  • Tang Y, Zheng J, Sun Y, Wu Z, Liu Z, Huang G (May 2009). "MicroRNA-1 regulates cardiomyocyte apoptosis by targeting Bcl-2". International Heart Journal. 50 (3): 377–87. doi:10.1536/ihj.50.377. PMID 19506341.
  • Shan ZX, Lin QX, Fu YH, Deng CY, Zhou ZL, Zhu JN, et al. (April 2009). "Upregulated expression of miR-1/miR-206 in a rat model of myocardial infarction". Biochemical and Biophysical Research Communications. 381 (4): 597–601. doi:10.1016/j.bbrc.2009.02.097. PMID 19245789.
  • Mishima Y, Abreu-Goodger C, Staton AA, Stahlhut C, Shou C, Cheng C, et al. (March 2009). "Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization". Genes & Development. 23 (5): 619–32. doi:10.1101/gad.1760209. PMC 2658521. PMID 19240126.
  • Ikeda S, He A, Kong SW, Lu J, Bejar R, Bodyak N, et al. (April 2009). "MicroRNA-1 negatively regulates expression of the hypertrophy-associated calmodulin and Mef2a genes". Molecular and Cellular Biology. 29 (8): 2193–204. doi:10.1128/MCB.01222-08. PMC 2663304. PMID 19188439.
  • Terentyev D, Belevych AE, Terentyeva R, Martin MM, Malana GE, Kuhn DE, et al. (February 2009). "miR-1 overexpression enhances Ca(2+) release and promotes cardiac arrhythmogenesis by targeting PP2A regulatory subunit B56alpha and causing CaMKII-dependent hyperphosphorylation of RyR2". Circulation Research. 104 (4): 514–21. doi:10.1161/CIRCRESAHA.108.181651. PMC 4394868. PMID 19131648.
  • Yu XY, Song YH, Geng YJ, Lin QX, Shan ZX, Lin SG, et al. (November 2008). "Glucose induces apoptosis of cardiomyocytes via microRNA-1 and IGF-1". Biochemical and Biophysical Research Communications. 376 (3): 548–52. doi:10.1016/j.bbrc.2008.09.025. PMID 18801338.
  • Sweetman D, Goljanek K, Rathjen T, Oustanina S, Braun T, Dalmay T, et al. (September 2008). "Specific requirements of MRFs for the expression of muscle specific microRNAs, miR-1, miR-206 and miR-133" (PDF). Developmental Biology. 321 (2): 491–9. doi:10.1016/j.ydbio.2008.06.019. PMID 18619954.
  • Simon DJ, Madison JM, Conery AL, Thompson-Peer KL, Soskis M, Ruvkun GB, Kaplan JM, Kim JK (May 2008). "The microRNA miR-1 regulates a MEF-2-dependent retrograde signal at neuromuscular junctions". Cell. 133 (5): 903–15. doi:10.1016/j.cell.2008.04.035. PMC 2553566. PMID 18510933.
  • Yang B, Lin H, Xiao J, Lu Y, Luo X, Li B, et al. (April 2007). "The muscle-specific microRNA miR-1 regulates cardiac arrhythmogenic potential by targeting GJA1 and KCNJ2". Nature Medicine. 13 (4): 486–91. doi:10.1038/nm1569. PMID 17401374. S2CID 1935811.
  • Mishima T, Mizuguchi Y, Kawahigashi Y, Takizawa T, Takizawa T (February 2007). "RT-PCR-based analysis of microRNA (miR-1 and -124) expression in mouse CNS". Brain Research. 1131 (1): 37–43. doi:10.1016/j.brainres.2006.11.035. PMID 17182009. S2CID 23792536.
  • Nakajima N, Takahashi T, Kitamura R, Isodono K, Asada S, Ueyama T, Matsubara H, Oh H (December 2006). "MicroRNA-1 facilitates skeletal myogenic differentiation without affecting osteoblastic and adipogenic differentiation". Biochemical and Biophysical Research Communications. 350 (4): 1006–12. doi:10.1016/j.bbrc.2006.09.153. PMID 17045567.
  • McCarthy JJ, Esser KA (January 2007). "MicroRNA-1 and microRNA-133a expression are decreased during skeletal muscle hypertrophy". Journal of Applied Physiology. 102 (1): 306–13. doi:10.1152/japplphysiol.00932.2006. PMID 17008435.
  • Chen JF, Mandel EM, Thomson JM, Wu Q, Callis TE, Hammond SM, et al. (February 2006). "The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation". Nature Genetics. 38 (2): 228–33. doi:10.1038/ng1725. PMC 2538576. PMID 16380711.
  • Kwon C, Han Z, Olson EN, Srivastava D (December 2005). "MicroRNA1 influences cardiac differentiation in Drosophila and regulates Notch signaling". Proceedings of the National Academy of Sciences of the United States of America. 102 (52): 18986–91. Bibcode:2005PNAS..10218986K. doi:10.1073/pnas.0509535102. PMC 1315275. PMID 16357195.
  • Sokol NS, Ambros V (October 2005). "Mesodermally expressed Drosophila microRNA-1 is regulated by Twist and is required in muscles during larval growth". Genes & Development. 19 (19): 2343–54. doi:10.1101/gad.1356105. PMC 1240043. PMID 16166373.
  • Jacoby GA, Tran J (July 1999). "Sequence of the MIR-1 beta-lactamase gene". Antimicrobial Agents and Chemotherapy. 43 (7): 1759–60. doi:10.1128/aac.43.7.1759. PMC 89358. PMID 10390237.
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External links

  • Page for mir-1 microRNA precursor family at Rfam
  • miRBase Entry for human mir-1-1
  • Ensembl gene page for human mir-1-1
  • NCBI Entrez gene page for human mir-1-1