Protein-coding gene in the species Homo sapiens
HKDC1 |
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Identifiers |
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Aliases | HKDC1, hexokinase domain containing 1, RP92 |
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External IDs | OMIM: 617221; MGI: 2384910; HomoloGene: 128937; GeneCards: HKDC1; OMA:HKDC1 - orthologs |
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Gene location (Human) |
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| Chr. | Chromosome 10 (human)[1] |
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| Band | 10q22.1 | Start | 69,220,332 bp[1] |
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End | 69,267,552 bp[1] |
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Gene location (Mouse) |
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| Chr. | Chromosome 10 (mouse)[2] |
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| Band | 10|10 B4 | Start | 62,218,916 bp[2] |
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End | 62,258,270 bp[2] |
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RNA expression pattern |
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Bgee | Human | Mouse (ortholog) |
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Top expressed in | - jejunal mucosa
- duodenum
- testicle
- mucosa of ileum
- mucosa of transverse colon
- islet of Langerhans
- gallbladder
- body of pancreas
- right uterine tube
- human kidney
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| Top expressed in | - renal calyx
- intestinal villus
- epithelium of small intestine
- jejunum
- lateral recess
- duodenum
- ileum
- yolk sac
- lateral ventricle
- choroid plexus of lateral ventricle
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| More reference expression data |
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BioGPS | |
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Gene ontology |
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Molecular function | - kinase activity
- transferase activity
- nucleotide binding
- fructokinase activity
- mannokinase activity
- glucokinase activity
- hexokinase activity
- ATP binding
- phosphotransferase activity, alcohol group as acceptor
- glucose binding
| Cellular component | | Biological process | - cellular glucose homeostasis
- hexose metabolic process
- glycolytic process
- carbohydrate phosphorylation
- phosphorylation
- glucose 6-phosphate metabolic process
- carbohydrate metabolic process
| Sources:Amigo / QuickGO |
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Orthologs |
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Species | Human | Mouse |
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Entrez | | |
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Ensembl | | |
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UniProt | | |
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RefSeq (mRNA) | | |
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RefSeq (protein) | | |
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Location (UCSC) | Chr 10: 69.22 – 69.27 Mb | Chr 10: 62.22 – 62.26 Mb |
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PubMed search | [3] | [4] |
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Wikidata |
View/Edit Human | View/Edit Mouse |
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Hexokinase domain containing 1 (HKDC1) is an enzyme which in humans is encoded by the HKDC1 gene on chromosome 10.[5] It is a recently discovered hexokinase isoform that likely phosphorylates glucose in maternal metabolism during pregnancy.[6][7]
Structure
The HKDC1 gene is oriented in a head-to-tail arrangement next to the HK1 gene on chromosome 10.[7][8] This arrangement, along with its amino acid sequence similarity to HK1, suggests that HKDC1 and HK1 derived from the same precursor via a tandem gene duplication event.[6][7][8] The similarity between HKDC1 and HK1 may have obscured its discovery in earlier screens for vertebrate hexokinases.[6] Unlike the HK2 pseudogene, HKDC1 contains an intact open reading frame of 917 residues and is conserved across animal species, indicating that it encodes a functional protein. Moreover, the encoded protein contains conserved glucose-binding sites in its N- and C-terminal domains as well as an ATP-binding site in its C-terminal domain, indicating that its C-terminal is capable of hexokinase activity.[7][8]
Function
As the recently identified fifth isoform of hexokinase, HKDC1 catalyzes the rate-limiting and first obligatory step of glucose metabolism, which is the ATP-dependent phosphorylation of glucose to G6P.[9] Though its particular biological function remains unclear, HKDC1 has been suggested to play a more major role in glucose metabolism during pregnancy, as the mother would need to provide enough energy for both herself and the fetus.[6][7] HKDC1 is ubiquitously expressed, with the highest levels of expression in pharynx, thymus, colon, esophagus, and eye tissue.[7][8]
Clinical significance
Cancer
Compared to the other hexokinases, HKDC1 was dramatically overexpressed in cancer tissues, indicating that this isoform might play an important and different role in cancer growth. Further experiments clarifying this role will be required for developing HKDC1 as a therapeutic target.[9]
Gestational hyperglycemia
Several regulatory variants, including various enhancers, targeting HKDC1 expression have been associated with gestational hyperglycemia in pregnant women.[6] Considering that maternal glucose levels during pregnancy impact both the fetal and later health outcomes, a greater understanding of the genetic mechanisms underlying maternal glycemia during pregnancy may help identify and aid such women at risk.[6][7]
See also
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000156510 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020080 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Entrez Gene: HKDC1 hexokinase domain containing 1".
- ^ a b c d e f Guo C, Ludvik AE, Arlotto ME, Hayes MG, Armstrong LL, Scholtens DM, et al. (February 2015). "Coordinated regulatory variation associated with gestational hyperglycaemia regulates expression of the novel hexokinase HKDC1". Nature Communications. 6: 6069. Bibcode:2015NatCo...6.6069G. doi:10.1038/ncomms7069. PMC 4318120. PMID 25648650.
- ^ a b c d e f g Hayes MG, Urbanek M, Hivert MF, Armstrong LL, Morrison J, Guo C, et al. (September 2013). "Identification of HKDC1 and BACE2 as genes influencing glycemic traits during pregnancy through genome-wide association studies". Diabetes. 62 (9): 3282–91. doi:10.2337/db12-1692. PMC 3749326. PMID 23903356.
- ^ a b c d Irwin DM, Tan H (March 2008). "Molecular evolution of the vertebrate hexokinase gene family: Identification of a conserved fifth vertebrate hexokinase gene". Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 3 (1): 96–107. doi:10.1016/j.cbd.2007.11.002. PMID 20483211.
- ^ a b Li GH, Huang JF (March 2014). "Inferring therapeutic targets from heterogeneous data: HKDC1 is a novel potential therapeutic target for cancer". Bioinformatics. 30 (6): 748–52. doi:10.1093/bioinformatics/btt606. PMID 24162464.
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